Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421804_102338 | Not Available | Positive | 1373197 - 1375452 | 84868.0 |
| aminobenzoyl-glutamate transport protein | SAMN05421804_102339 | Not Available | Positive | 1375877 - 1377406 | 54020.4 |
| tripeptide aminopeptidase | SAMN05421804_102340 | Not Available | Positive | 1377495 - 1378601 | 39559.5 |
| 23s rrna pseudouridine2604 synthase | SAMN05421804_102341 | Not Available | Negative | 1378675 - 1379379 | 26578.2 |
| protein of unknown function | SAMN05421804_102342 | Not Available | Positive | 1379547 - 1379900 | 13326.8 |
| protein of unknown function | SAMN05421804_102343 | Not Available | Positive | 1379919 - 1380584 | 24670.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421804_102344 | Not Available | Positive | 1380742 - 1383030 | 88357.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421804_102345 | Not Available | Positive | 1383159 - 1385447 | 86807.9 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein/hdig domain-containing protein | SAMN05421804_102346 | Not Available | Positive | 1385448 - 1387838 | 91515.5 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05421804_102347 | Not Available | Positive | 1388051 - 1390369 | 87254.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
