Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421804_102318 | Not Available | Positive | 1354466 - 1355338 | 33363.7 |
| hypothetical protein | SAMN05421804_102319 | Not Available | Positive | 1355339 - 1355926 | 22044.2 |
| sigma-b regulation protein rsbq | SAMN05421804_102320 | Not Available | Positive | 1355968 - 1356765 | 30308.2 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421804_102321 | Not Available | Positive | 1356777 - 1357751 | 37286.3 |
| mn-dependent transcriptional regulator, dtxr family | SAMN05421804_102322 | Not Available | Positive | 1358060 - 1358449 | 14709.0 |
| ferrous iron transport protein a | SAMN05421804_102323 | Not Available | Positive | 1358461 - 1358745 | 10805.1 |
| ferrous iron transport protein b | SAMN05421804_102324 | Not Available | Positive | 1358839 - 1360839 | 72719.1 |
| virus attachment protein p12 family protein | SAMN05421804_102325 | Not Available | Positive | 1360840 - 1361016 | 6173.68 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421804_102326 | Not Available | Positive | 1361120 - 1361803 | 26601.6 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421804_102327 | Not Available | Positive | 1361941 - 1363464 | 58267.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
