Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sipw-cognate class signal peptide | SAMN05421804_102208 | Not Available | Positive | 1249370 - 1249993 | 22005.1 |
| hypothetical protein | SAMN05421804_102209 | Not Available | Positive | 1250034 - 1250612 | 21097.9 |
| hypothetical protein | SAMN05421804_102210 | Not Available | Positive | 1250676 - 1253912 | 118075.0 |
| hypothetical protein | SAMN05421804_102211 | Not Available | Positive | 1253909 - 1254451 | 19582.5 |
| lpxtg-motif cell wall anchor domain-containing protein | SAMN05421804_102212 | Not Available | Positive | 1254448 - 1255146 | 26668.7 |
| dna-binding transcriptional regulator, murr/rpir family, contains hth and sis domains | SAMN05421804_102213 | Not Available | Positive | 1255464 - 1256354 | 33572.3 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN05421804_102214 | Not Available | Positive | 1256358 - 1257254 | 31990.8 |
| pts system, sucrose-specific iic component | SAMN05421804_102215 | Not Available | Positive | 1257272 - 1258693 | 49599.3 |
| hypothetical protein | SAMN05421804_102216 | Not Available | Positive | 1258680 - 1259729 | 39967.6 |
| sugar phosphate isomerase/epimerase | SAMN05421804_102217 | Not Available | Positive | 1259861 - 1260691 | 30657.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
