Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN05421804_102188 | Not Available | Positive | 1224089 - 1225240 | 43762.5 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05421804_102189 | Not Available | Positive | 1225267 - 1226157 | 33210.1 |
| oxidoreductase family, c-terminal alpha/beta domain | SAMN05421804_102190 | Not Available | Positive | 1226536 - 1227246 | 27180.1 |
| n-acylglucosamine-6-phosphate 2-epimerase | SAMN05421804_102191 | Not Available | Positive | 1227349 - 1228038 | 24947.4 |
| rok family protein (putative glucokinase) | SAMN05421804_102192 | Not Available | Positive | 1228079 - 1228969 | 32275.0 |
| dna-binding transcriptional regulator, murr/rpir family, contains hth and sis domains | SAMN05421804_102193 | Not Available | Positive | 1228993 - 1229853 | 31519.9 |
| yhch/yjgk/yial family protein | SAMN05421804_102194 | Not Available | Positive | 1229927 - 1230388 | 18036.4 |
| acetate coa/acetoacetate coa-transferase beta subunit | SAMN05421804_102195 | Not Available | Negative | 1231028 - 1231699 | 23721.3 |
| acetate coa/acetoacetate coa-transferase alpha subunit | SAMN05421804_102196 | Not Available | Negative | 1231700 - 1232449 | 27275.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05421804_102197 | Not Available | Positive | 1232595 - 1233539 | 35899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
