Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nmda receptor-regulated protein 1 | SAMN05421804_102178 | Not Available | Positive | 1197392 - 1200670 | 126521.0 |
| hypothetical protein | SAMN05421804_102179 | Not Available | Positive | 1201022 - 1201972 | 33379.6 |
| protein of unknown function | SAMN05421804_102180 | Not Available | Positive | 1201973 - 1202443 | 17403.2 |
| trap transporter, 4tm/12tm fusion protein | SAMN05421804_102181 | Not Available | Positive | 1202467 - 1204401 | 68833.3 |
| fumarate reductase flavoprotein subunit | SAMN05421804_102182 | Not Available | Positive | 1204759 - 1206519 | 61018.4 |
| hsp20 family protein | SAMN05421804_102183 | Not Available | Positive | 1206877 - 1207323 | 17285.5 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421804_102184 | Not Available | Positive | 1207575 - 1210604 | 117263.0 |
| ig-like domain (group 3) | SAMN05421804_102185 | Not Available | Positive | 1211209 - 1219684 | 316970.0 |
| ig-like domain (group 3) | SAMN05421804_102186 | Not Available | Positive | 1221012 - 1221281 | 10112.9 |
| lpxtg-motif cell wall anchor domain-containing protein | SAMN05421804_102187 | Not Available | Positive | 1221557 - 1223908 | 87300.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
