Proteiniclasticum ruminis strain CGMCC 1.5058

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Proteiniclasticum

Description

Proteiniclasticum ruminis strain CGMCC 1.5058 is a notable bacterium characterized by possessing a single replicon. This trait indicates a streamlined genomic structure, which may contribute to its adaptability and efficiency in specific environments. The strain is cataloged under the accession number FNDZ00000000.1, providing a unique identifier for researchers seeking to locate genomic and taxonomic information about this organism. As a member of the genus Proteiniclasticum, this strain is likely involved in the degradation of proteins, which suggests its potential role in nutrient cycling within its ecological niche. While specific metabolic pathways and ecological interactions of Proteiniclasticum ruminis strain CGMCC 1.5058 are not detailed here, the genus itself is known for its contributions to the breakdown of complex organic materials, particularly in anaerobic environments such as the rumen of herbivorous animals. The presence of this bacterium within the digestive systems of ruminants may indicate its significance in enhancing the efficiency of nutrient absorption and digestion. This relationship not only highlights the importance of microbial communities in host nutrition but also emphasizes the ecological interactions between microorganisms and their hosts. Understanding the role of strains like Proteiniclasticum ruminis can provide insights into the complex dynamics of microbial ecosystems and their contributions to the health and productivity of ruminant livestock.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusProteiniclasticum
SpeciesProteiniclasticum ruminis
Strainstrain CGMCC 1.5058

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatantibiotic-contaminated sites adjacent to livestock facilities; sediment samples
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Proteiniclasticum ruminis strain CGMCC 1.5058 genome assembly,

Gene Summary

Adenine Count

877739 bp

Thymine Count

893774 bp

Guanine Count

664573 bp

Cytosine Count

679392 bp

Genome Length

3119379 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acylglucosamine-6-phosphate 2-epimeraseSAMN05421804_102128Not AvailablePositive1134939 - 113562525096.8
integrase core domain-containing proteinSAMN05421804_102129Not AvailableNegative1135875 - 113637218832.1
hypothetical proteinSAMN05421804_102130Not AvailableNegative1136397 - 11366369568.44
hypothetical proteinSAMN05421804_102131Not AvailableNegative1136633 - 113703415212.2
xaa-pro aminopeptidaseSAMN05421804_102132Not AvailablePositive1138028 - 113942853290.1
hypothetical proteinSAMN05421804_102133Not AvailableNegative1139586 - 114078846231.1
nuclease-related domain-containing proteinSAMN05421804_102134Not AvailablePositive1141069 - 114178828063.0
uncharacterised protein family (upf0158)SAMN05421804_102135Not AvailablePositive1141868 - 114229616685.6
dna-binding transcriptional regulator, murr/rpir family, contains hth and sis domainsSAMN05421804_102136Not AvailableNegative1142354 - 114306127316.1
alkyldihydroxyacetonephosphate synthaseSAMN05421804_102137Not AvailablePositive1143306 - 114477555709.3

Displaying genes 1071 – 1080 of 2943 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.