Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | strain CGMCC 1.5058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
877739 bp
Thymine Count
893774 bp
Guanine Count
664573 bp
Cytosine Count
679392 bp
Genome Length
3119379 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acylglucosamine-6-phosphate 2-epimerase | SAMN05421804_102128 | Not Available | Positive | 1134939 - 1135625 | 25096.8 |
| integrase core domain-containing protein | SAMN05421804_102129 | Not Available | Negative | 1135875 - 1136372 | 18832.1 |
| hypothetical protein | SAMN05421804_102130 | Not Available | Negative | 1136397 - 1136636 | 9568.44 |
| hypothetical protein | SAMN05421804_102131 | Not Available | Negative | 1136633 - 1137034 | 15212.2 |
| xaa-pro aminopeptidase | SAMN05421804_102132 | Not Available | Positive | 1138028 - 1139428 | 53290.1 |
| hypothetical protein | SAMN05421804_102133 | Not Available | Negative | 1139586 - 1140788 | 46231.1 |
| nuclease-related domain-containing protein | SAMN05421804_102134 | Not Available | Positive | 1141069 - 1141788 | 28063.0 |
| uncharacterised protein family (upf0158) | SAMN05421804_102135 | Not Available | Positive | 1141868 - 1142296 | 16685.6 |
| dna-binding transcriptional regulator, murr/rpir family, contains hth and sis domains | SAMN05421804_102136 | Not Available | Negative | 1142354 - 1143061 | 27316.1 |
| alkyldihydroxyacetonephosphate synthase | SAMN05421804_102137 | Not Available | Positive | 1143306 - 1144775 | 55709.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
