Pseudomonas panipatensis strain CCM 7469

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas panipatensis strain CCM 7469 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain possesses a single replicon, indicating a relatively simple genomic structure. Notably, Pseudomonas panipatensis is non-spore-forming, which suggests that it does not produce spores as a means of survival under adverse environmental conditions. The classification of Pseudomonas panipatensis within the Pseudomonas genus indicates its potential metabolic versatility, commonly associated with members of this group. The strain's aerobic requirement means it thrives in the presence of oxygen, which is typical for many Pseudomonas species, allowing it to participate actively in various ecological processes, particularly in nutrient cycling and biodegradation. The accession number FNDS00000000.1 provides a reference for genetic and genomic studies related to this strain, facilitating further research into its biological functions and potential applications. Understanding the traits of Pseudomonas panipatensis can offer insights into its role in environmental microbiology, particularly in soil and water ecosystems where aerobic conditions prevail. The strain's characteristics may contribute to its utility in bioremediation efforts, where oxygen availability and metabolic adaptability are crucial for the degradation of pollutants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas panipatensis
Strainstrain CCM 7469

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas panipatensis strain CCM 7469
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas panipatensis strain CCM 7469 genome assembly, contig:

Gene Summary

Adenine Count

987694 bp

Thymine Count

1001320 bp

Guanine Count

1909756 bp

Cytosine Count

1876275 bp

Genome Length

5775530 bp

Protein-coding Genes

5136 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
h+/cl-antiporter clcaSAMN05216272_1164Not AvailableNegative5392236 - 539361848865.5
regulatory protein, luxr familySAMN05216272_1165Not AvailableNegative5394030 - 539472525893.2
ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) familySAMN05216272_1166Not AvailablePositive5394983 - 539587633322.5
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN05216272_1167Not AvailablePositive5395888 - 539630115057.0
amino acid transporterSAMN05216272_1168Not AvailablePositive5396403 - 539783050103.6
dna-binding response regulator, narl/fixj family, contains rec and hth domainsSAMN05216272_1169Not AvailableNegative5398311 - 539897623871.9
signal transduction histidine kinaseSAMN05216272_11610Not AvailableNegative5398973 - 5402368124500.0
urea transport system substrate-binding proteinSAMN05216272_11611Not AvailablePositive5402668 - 540391244966.8
urea transport system permease proteinSAMN05216272_11612Not AvailablePositive5403978 - 540489533216.6
urea transport system permease proteinSAMN05216272_11613Not AvailablePositive5404906 - 540608142235.6

Displaying genes 5011 – 5020 of 5345 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.