Pseudomonas panipatensis strain CCM 7469

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas panipatensis strain CCM 7469 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain possesses a single replicon, indicating a relatively simple genomic structure. Notably, Pseudomonas panipatensis is non-spore-forming, which suggests that it does not produce spores as a means of survival under adverse environmental conditions. The classification of Pseudomonas panipatensis within the Pseudomonas genus indicates its potential metabolic versatility, commonly associated with members of this group. The strain's aerobic requirement means it thrives in the presence of oxygen, which is typical for many Pseudomonas species, allowing it to participate actively in various ecological processes, particularly in nutrient cycling and biodegradation. The accession number FNDS00000000.1 provides a reference for genetic and genomic studies related to this strain, facilitating further research into its biological functions and potential applications. Understanding the traits of Pseudomonas panipatensis can offer insights into its role in environmental microbiology, particularly in soil and water ecosystems where aerobic conditions prevail. The strain's characteristics may contribute to its utility in bioremediation efforts, where oxygen availability and metabolic adaptability are crucial for the degradation of pollutants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas panipatensis
Strainstrain CCM 7469

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas panipatensis strain CCM 7469
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas panipatensis strain CCM 7469 genome assembly, contig:

Gene Summary

Adenine Count

987694 bp

Thymine Count

1001320 bp

Guanine Count

1909756 bp

Cytosine Count

1876275 bp

Genome Length

5775530 bp

Protein-coding Genes

5136 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
octopine/nopaline transport system substrate-binding proteinSAMN05216272_11023Not AvailableNegative4583521 - 458438431209.5
hypothetical proteinSAMN05216272_11024Not AvailableNegative4584480 - 458526829827.5
lysr family transcriptional regulator, glycine cleavage system transcriptional activatorSAMN05216272_11025Not AvailablePositive4585375 - 458626832720.6
cupin domain-containing proteinSAMN05216272_11026Not AvailableNegative4586298 - 458664212385.7
uncharacterized conserved protein ybbc, duf1343 familySAMN05216272_11027Not AvailableNegative4586837 - 458913181669.6
hypothetical proteinSAMN05216272_11028Not AvailableNegative4589128 - 459039346162.1
peptidoglycan/xylan/chitin deacetylase, pgda/cda1 familySAMN05216272_11029Not AvailableNegative4590390 - 459117529526.7
protein of unknown functionSAMN05216272_11030Not AvailablePositive4591589 - 459226624952.8
multiple antibiotic resistance proteinSAMN05216272_11031Not AvailablePositive4592419 - 459309324120.1
deoxyribodipyrimidine photolyase-related proteinSAMN05216272_11032Not AvailableNegative4593232 - 459477358004.6

Displaying genes 4331 – 4340 of 5345 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.