Pseudomonas panipatensis strain CCM 7469

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas panipatensis strain CCM 7469 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain possesses a single replicon, indicating a relatively simple genomic structure. Notably, Pseudomonas panipatensis is non-spore-forming, which suggests that it does not produce spores as a means of survival under adverse environmental conditions. The classification of Pseudomonas panipatensis within the Pseudomonas genus indicates its potential metabolic versatility, commonly associated with members of this group. The strain's aerobic requirement means it thrives in the presence of oxygen, which is typical for many Pseudomonas species, allowing it to participate actively in various ecological processes, particularly in nutrient cycling and biodegradation. The accession number FNDS00000000.1 provides a reference for genetic and genomic studies related to this strain, facilitating further research into its biological functions and potential applications. Understanding the traits of Pseudomonas panipatensis can offer insights into its role in environmental microbiology, particularly in soil and water ecosystems where aerobic conditions prevail. The strain's characteristics may contribute to its utility in bioremediation efforts, where oxygen availability and metabolic adaptability are crucial for the degradation of pollutants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas panipatensis
Strainstrain CCM 7469

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas panipatensis strain CCM 7469
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas panipatensis strain CCM 7469 genome assembly, contig:

Gene Summary

Adenine Count

987694 bp

Thymine Count

1001320 bp

Guanine Count

1909756 bp

Cytosine Count

1876275 bp

Genome Length

5775530 bp

Protein-coding Genes

5136 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseSAMN05216272_104133Not AvailablePositive2293177 - 229394728551.9
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseSAMN05216272_104134Not AvailablePositive2293965 - 229542552745.4
3,4-dihydroxyphenylacetate 2,3-dioxygenaseSAMN05216272_104135Not AvailablePositive2295546 - 229646933556.7
5-carboxymethyl-2-hydroxymuconate delta isomeraseSAMN05216272_104136Not AvailablePositive2296481 - 229687314431.2
sugar phosphate permeaseSAMN05216272_104137Not AvailablePositive2296916 - 229822347073.5
2-oxohept-3-enedioate hydrataseSAMN05216272_104138Not AvailablePositive2298235 - 229903829195.0
4-hydroxy-2-oxoheptanedioate aldolaseSAMN05216272_104139Not AvailablePositive2299049 - 229985528154.0
homoprotocatechuate degradation operon regulator, hparSAMN05216272_104140Not AvailableNegative2299893 - 230031516152.8
uncharacterized conserved protein glcg, duf336 familySAMN05216272_104141Not AvailablePositive2300461 - 230090115186.2
gamma-glutamylputrescine oxidaseSAMN05216272_104142Not AvailablePositive2301037 - 230233547708.6

Displaying genes 2291 – 2300 of 5345 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.