Pseudomonas panipatensis strain CCM 7469

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas panipatensis strain CCM 7469 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain possesses a single replicon, indicating a relatively simple genomic structure. Notably, Pseudomonas panipatensis is non-spore-forming, which suggests that it does not produce spores as a means of survival under adverse environmental conditions. The classification of Pseudomonas panipatensis within the Pseudomonas genus indicates its potential metabolic versatility, commonly associated with members of this group. The strain's aerobic requirement means it thrives in the presence of oxygen, which is typical for many Pseudomonas species, allowing it to participate actively in various ecological processes, particularly in nutrient cycling and biodegradation. The accession number FNDS00000000.1 provides a reference for genetic and genomic studies related to this strain, facilitating further research into its biological functions and potential applications. Understanding the traits of Pseudomonas panipatensis can offer insights into its role in environmental microbiology, particularly in soil and water ecosystems where aerobic conditions prevail. The strain's characteristics may contribute to its utility in bioremediation efforts, where oxygen availability and metabolic adaptability are crucial for the degradation of pollutants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas panipatensis
Strainstrain CCM 7469

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas panipatensis strain CCM 7469
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas panipatensis strain CCM 7469 genome assembly, contig:

Gene Summary

Adenine Count

987694 bp

Thymine Count

1001320 bp

Guanine Count

1909756 bp

Cytosine Count

1876275 bp

Genome Length

5775530 bp

Protein-coding Genes

5136 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c oxidase accessory protein fixgSAMN05216272_102626Not AvailablePositive1521297 - 152271252476.9
dna-binding transcriptional regulator, mocr family, contains an aminotransferase domainSAMN05216272_102627Not AvailablePositive1522715 - 152419654680.4
hypothetical proteinSAMN05216272_102628Not AvailablePositive1524330 - 15244524668.72
4-hydroxy-2-oxovalerate/4-hydroxy-2- oxohexanoate aldolaseSAMN05216272_102629Not AvailableNegative1524505 - 152553936466.3
acetaldehyde/propanal dehydrogenaseSAMN05216272_102630Not AvailableNegative1525553 - 152646132450.4
2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydrataseSAMN05216272_102631Not AvailableNegative1526471 - 152726228672.4
4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolaseSAMN05216272_102632Not AvailableNegative1527259 - 152808629714.9
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05216272_102633Not AvailablePositive1528255 - 152903126879.3
polyketide cyclase / dehydrase and lipid transportSAMN05216272_102634Not AvailablePositive1529036 - 152952718320.0
steroid delta-isomeraseSAMN05216272_102635Not AvailableNegative1529580 - 152996314101.0

Displaying genes 1591 – 1600 of 5345 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.