Pseudomonas panipatensis strain CCM 7469

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas panipatensis strain CCM 7469 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain possesses a single replicon, indicating a relatively simple genomic structure. Notably, Pseudomonas panipatensis is non-spore-forming, which suggests that it does not produce spores as a means of survival under adverse environmental conditions. The classification of Pseudomonas panipatensis within the Pseudomonas genus indicates its potential metabolic versatility, commonly associated with members of this group. The strain's aerobic requirement means it thrives in the presence of oxygen, which is typical for many Pseudomonas species, allowing it to participate actively in various ecological processes, particularly in nutrient cycling and biodegradation. The accession number FNDS00000000.1 provides a reference for genetic and genomic studies related to this strain, facilitating further research into its biological functions and potential applications. Understanding the traits of Pseudomonas panipatensis can offer insights into its role in environmental microbiology, particularly in soil and water ecosystems where aerobic conditions prevail. The strain's characteristics may contribute to its utility in bioremediation efforts, where oxygen availability and metabolic adaptability are crucial for the degradation of pollutants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas panipatensis
Strainstrain CCM 7469

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas panipatensis strain CCM 7469
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas panipatensis strain CCM 7469 genome assembly, contig:

Gene Summary

Adenine Count

987694 bp

Thymine Count

1001320 bp

Guanine Count

1909756 bp

Cytosine Count

1876275 bp

Genome Length

5775530 bp

Protein-coding Genes

5136 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease atp-binding subunit clpbSAMN05216272_102393Not AvailableNegative1278682 - 128124695260.8
conserved hypothetical proteinSAMN05216272_102394Not AvailableNegative1281459 - 128218425517.2
23s rrna pseudouridine1911/1915/1917 synthaseSAMN05216272_102395Not AvailableNegative1282181 - 128314035223.6
outer membrane protein assembly factor bamdSAMN05216272_102396Not AvailablePositive1283288 - 128430138215.8
uncharacterized proteinSAMN05216272_102397Not AvailablePositive1284458 - 12846858850.67
two-component system, ntrc family, sensor histidine kinase pilsSAMN05216272_102398Not AvailablePositive1284678 - 128626758376.4
two-component system, ntrc family, response regulator pilrSAMN05216272_102399Not AvailablePositive1286283 - 128762349841.1
glycine oxidaseSAMN05216272_102400Not AvailableNegative1287691 - 128880039386.5
type iv fimbrial biogenesis protein fimtSAMN05216272_102401Not AvailablePositive1288995 - 128950718806.7
type iv fimbrial biogenesis protein fimtSAMN05216272_102402Not AvailablePositive1289658 - 129018518075.6

Displaying genes 1361 – 1370 of 5345 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.