Winogradskyella thalassocola strain DSM 15363

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Winogradskyella

Description

Winogradskyella thalassocola strain DSM 15363 is a notable microorganism characterized by having a single replicon, which may suggest a streamlined genomic structure. This strain is documented in the sequence database under the accession number FNCZ00000000.1, providing a reference for its genetic information. As a member of the Winogradskyella genus, W. thalassocola is typically associated with marine environments, which hints at its potential ecological roles in such ecosystems. The unique features of this strain may contribute to biogeochemical processes, possibly including nutrient cycling in marine habitats. The single replicon characteristic may also indicate specific adaptive strategies to its ecological niche, potentially enhancing its survival and functional capabilities in marine sediments or water columns. Overall, understanding the genomic attributes and ecological roles of Winogradskyella thalassocola strain DSM 15363 can provide insights into the microbial dynamics of marine environments, emphasizing the importance of such microorganisms in maintaining ecological balance and facilitating nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusWinogradskyella
SpeciesWinogradskyella thalassocola
Strainstrain DSM 15363

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Winogradskyella thalassocola strain DSM 15363 genome assembly,

Gene Summary

Adenine Count

1524446 bp

Thymine Count

1525767 bp

Guanine Count

774828 bp

Cytosine Count

746845 bp

Genome Length

4573152 bp

Protein-coding Genes

3960 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component sensor histidine kinase, contains hiska and hatpase domainsSAMN04489796_1134Not AvailablePositive4387774 - 438984979319.1
dna-binding response regulator, lytr/algr familySAMN04489796_1135Not AvailablePositive4389839 - 439054026787.1
[acyl-carrier-protein] s-malonyltransferaseSAMN04489796_1136Not AvailablePositive4391106 - 439199931864.2
signal peptidase iiSAMN04489796_1137Not AvailablePositive4392011 - 439251418665.6
hypothetical proteinSAMN04489796_1138Not AvailableNegative4392525 - 43927167569.43
imidazolonepropionaseSAMN04489796_1139Not AvailableNegative4392906 - 439418345615.4
udp-glucose 4-epimeraseSAMN04489796_11310Not AvailableNegative4394199 - 439521837411.5
dtdp-4-amino-4,6-dideoxygalactose transaminaseSAMN04489796_11311Not AvailableNegative4395310 - 439645541756.6
3-deoxy-d-manno-octulosonic-acid transferaseSAMN04489796_11312Not AvailablePositive4396595 - 439782745953.2
alkylated dna repair dioxygenase alkbSAMN04489796_11313Not AvailableNegative4397828 - 439843023151.9

Displaying genes 3831 – 3840 of 4008 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.