Winogradskyella thalassocola strain DSM 15363

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Winogradskyella

Description

Winogradskyella thalassocola strain DSM 15363 is a notable microorganism characterized by having a single replicon, which may suggest a streamlined genomic structure. This strain is documented in the sequence database under the accession number FNCZ00000000.1, providing a reference for its genetic information. As a member of the Winogradskyella genus, W. thalassocola is typically associated with marine environments, which hints at its potential ecological roles in such ecosystems. The unique features of this strain may contribute to biogeochemical processes, possibly including nutrient cycling in marine habitats. The single replicon characteristic may also indicate specific adaptive strategies to its ecological niche, potentially enhancing its survival and functional capabilities in marine sediments or water columns. Overall, understanding the genomic attributes and ecological roles of Winogradskyella thalassocola strain DSM 15363 can provide insights into the microbial dynamics of marine environments, emphasizing the importance of such microorganisms in maintaining ecological balance and facilitating nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusWinogradskyella
SpeciesWinogradskyella thalassocola
Strainstrain DSM 15363

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Winogradskyella thalassocola strain DSM 15363 genome assembly,

Gene Summary

Adenine Count

1524446 bp

Thymine Count

1525767 bp

Guanine Count

774828 bp

Cytosine Count

746845 bp

Genome Length

4573152 bp

Protein-coding Genes

3960 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate decarboxylaseSAMN04489796_10473Not AvailablePositive2747640 - 274890247578.6
predicted purr-regulated permease permSAMN04489796_10474Not AvailablePositive2748994 - 275000437323.3
tricorn proteaseSAMN04489796_10475Not AvailablePositive2750102 - 2753371122508.0
carboxypepd_reg-like domain-containing proteinSAMN04489796_10476Not AvailableNegative2753500 - 275512262006.8
hypothetical proteinSAMN04489796_10477Not AvailableNegative2755127 - 275571422298.6
polyphosphate:nucleotide phosphotransferase, ppk2 familySAMN04489796_10478Not AvailableNegative2755707 - 275658534666.9
dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domainsSAMN04489796_10479Not AvailableNegative2756598 - 275776143251.4
mechanosensitive ion channelSAMN04489796_10480Not AvailableNegative2757843 - 275871832739.9
abc-2 type transport system permease proteinSAMN04489796_10481Not AvailableNegative2758722 - 276003548570.0
abc-2 type transport system atp-binding proteinSAMN04489796_10482Not AvailableNegative2760038 - 276096434709.0

Displaying genes 2351 – 2360 of 4008 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.