Winogradskyella thalassocola strain DSM 15363

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Winogradskyella

Description

Winogradskyella thalassocola strain DSM 15363 is a notable microorganism characterized by having a single replicon, which may suggest a streamlined genomic structure. This strain is documented in the sequence database under the accession number FNCZ00000000.1, providing a reference for its genetic information. As a member of the Winogradskyella genus, W. thalassocola is typically associated with marine environments, which hints at its potential ecological roles in such ecosystems. The unique features of this strain may contribute to biogeochemical processes, possibly including nutrient cycling in marine habitats. The single replicon characteristic may also indicate specific adaptive strategies to its ecological niche, potentially enhancing its survival and functional capabilities in marine sediments or water columns. Overall, understanding the genomic attributes and ecological roles of Winogradskyella thalassocola strain DSM 15363 can provide insights into the microbial dynamics of marine environments, emphasizing the importance of such microorganisms in maintaining ecological balance and facilitating nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusWinogradskyella
SpeciesWinogradskyella thalassocola
Strainstrain DSM 15363

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Winogradskyella thalassocola strain DSM 15363 genome assembly,

Gene Summary

Adenine Count

1524446 bp

Thymine Count

1525767 bp

Guanine Count

774828 bp

Cytosine Count

746845 bp

Genome Length

4573152 bp

Protein-coding Genes

3960 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epscSAMN04489796_103224Not AvailableNegative2400131 - 240202670548.4
dtdp-4-amino-4,6-dideoxygalactose transaminaseSAMN04489796_103225Not AvailableNegative2402020 - 240314741784.8
carbamoyl-phosphate synthase large subunitSAMN04489796_103226Not AvailablePositive2403529 - 240450037607.5
putative hydrolase of the had superfamilySAMN04489796_103227Not AvailablePositive2404484 - 240514025241.7
sugar transferase involved in lps biosynthesis (colanic, teichoic acid)SAMN04489796_103228Not AvailableNegative2405144 - 240576123574.2
glycosyltransferase involved in cell wall bisynthesisSAMN04489796_103229Not AvailableNegative2405758 - 240690943299.9
asparagine synthase (glutamine-hydrolysing)SAMN04489796_103230Not AvailableNegative2406913 - 240881472776.5
n-acetylgalactosamine-n, n'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-n-acetylgalactosaminyltransferaseSAMN04489796_103231Not AvailableNegative2408823 - 240997143638.1
sugar-transfer associated atp-graspSAMN04489796_103232Not AvailableNegative2409981 - 241103040629.7
glycosyltransferase involved in cell wall bisynthesisSAMN04489796_103233Not AvailableNegative2411059 - 241213840844.7

Displaying genes 2071 – 2080 of 4008 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.