Winogradskyella thalassocola strain DSM 15363

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Winogradskyella

Description

Winogradskyella thalassocola strain DSM 15363 is a notable microorganism characterized by having a single replicon, which may suggest a streamlined genomic structure. This strain is documented in the sequence database under the accession number FNCZ00000000.1, providing a reference for its genetic information. As a member of the Winogradskyella genus, W. thalassocola is typically associated with marine environments, which hints at its potential ecological roles in such ecosystems. The unique features of this strain may contribute to biogeochemical processes, possibly including nutrient cycling in marine habitats. The single replicon characteristic may also indicate specific adaptive strategies to its ecological niche, potentially enhancing its survival and functional capabilities in marine sediments or water columns. Overall, understanding the genomic attributes and ecological roles of Winogradskyella thalassocola strain DSM 15363 can provide insights into the microbial dynamics of marine environments, emphasizing the importance of such microorganisms in maintaining ecological balance and facilitating nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusWinogradskyella
SpeciesWinogradskyella thalassocola
Strainstrain DSM 15363

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Winogradskyella thalassocola strain DSM 15363 genome assembly,

Gene Summary

Adenine Count

1524446 bp

Thymine Count

1525767 bp

Guanine Count

774828 bp

Cytosine Count

746845 bp

Genome Length

4573152 bp

Protein-coding Genes

3960 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
por secretion system c-terminal sorting domain-containing proteinSAMN04489796_101169Not AvailableNegative200351 - 20131634813.4
hypothetical proteinSAMN04489796_101170Not AvailablePositive201580 - 2018228825.77
transcriptional regulator, laci familySAMN04489796_101171Not AvailableNegative202040 - 20255518924.6
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN04489796_101172Not AvailableNegative202559 - 20322723883.2
6-phosphofructokinase 1SAMN04489796_101173Not AvailableNegative203239 - 20445645136.1
2-dehydro-3-deoxygluconokinaseSAMN04489796_101174Not AvailableNegative204477 - 20552338300.9
transcriptional regulator, laci familySAMN04489796_101175Not AvailablePositive205671 - 20669037744.2
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04489796_101176Not AvailableNegative206814 - 20757826678.7
mfs transporter, acs family, hexuronate transporterSAMN04489796_101177Not AvailableNegative207625 - 20901950528.2
transcriptional regulator, gntr familySAMN04489796_101178Not AvailableNegative209036 - 20974326836.8

Displaying genes 171 – 180 of 4008 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.