Winogradskyella thalassocola strain DSM 15363

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Winogradskyella

Description

Winogradskyella thalassocola strain DSM 15363 is a notable microorganism characterized by having a single replicon, which may suggest a streamlined genomic structure. This strain is documented in the sequence database under the accession number FNCZ00000000.1, providing a reference for its genetic information. As a member of the Winogradskyella genus, W. thalassocola is typically associated with marine environments, which hints at its potential ecological roles in such ecosystems. The unique features of this strain may contribute to biogeochemical processes, possibly including nutrient cycling in marine habitats. The single replicon characteristic may also indicate specific adaptive strategies to its ecological niche, potentially enhancing its survival and functional capabilities in marine sediments or water columns. Overall, understanding the genomic attributes and ecological roles of Winogradskyella thalassocola strain DSM 15363 can provide insights into the microbial dynamics of marine environments, emphasizing the importance of such microorganisms in maintaining ecological balance and facilitating nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusWinogradskyella
SpeciesWinogradskyella thalassocola
Strainstrain DSM 15363

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Winogradskyella thalassocola strain DSM 15363 genome assembly,

Gene Summary

Adenine Count

1524446 bp

Thymine Count

1525767 bp

Guanine Count

774828 bp

Cytosine Count

746845 bp

Genome Length

4573152 bp

Protein-coding Genes

3960 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase iiSAMN04489796_102360Not AvailableNegative2071542 - 207269342587.5
lipopolysaccharide export system permease proteinSAMN04489796_102361Not AvailableNegative2072725 - 207465973332.8
outer membrane lipoprotein-sorting proteinSAMN04489796_102362Not AvailableNegative2074798 - 207543924222.8
dna segregation atpase ftsk/spoiiie, s-dna-t familySAMN04489796_102363Not AvailableNegative2075504 - 207795190774.2
d-alanyl-d-alanine carboxypeptidaseSAMN04489796_102364Not AvailableNegative2078005 - 207877229345.8
diacylglycerol kinase (atp)SAMN04489796_102365Not AvailableNegative2078945 - 207931313312.8
thiol peroxidase (atypical 2-cys peroxiredoxin)SAMN04489796_102366Not AvailableNegative2079321 - 207982117591.6
phenylalanyl-trna synthetase beta subunitSAMN04489796_102367Not AvailableNegative2079978 - 208240490105.6
peroxiredoxinSAMN04489796_102368Not AvailablePositive2082523 - 208374046375.8
hypothetical proteinSAMN04489796_102369Not AvailableNegative2083779 - 208462132115.6

Displaying genes 1761 – 1770 of 4008 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.