Propionivibrio dicarboxylicus strain DSM 5885

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Rhodocyclaceae

Genus

Propionivibrio

Description

Propionivibrio dicarboxylicus strain DSM 5885 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This trait is crucial for its metabolic processes and ecological niche, as it suggests the organism may inhabit anaerobic environments, such as sediments or the gastrointestinal tracts of certain animals. The strain is characterized by a single replicon, which means it has a singular circular chromosome that carries the genetic information necessary for its survival and reproduction. This genetic structure can affect its adaptability and evolutionary strategies in response to environmental changes. The accession number for Propionivibrio dicarboxylicus strain DSM 5885 is FNCY00000000.1, which is vital for researchers looking to access its genomic data in biological databases. This information can facilitate further studies on its genetics, metabolism, and potential applications in biotechnology or microbiology. In summary, the anaerobic nature of Propionivibrio dicarboxylicus strain DSM 5885, along with its single replicon, positions it as a specialized organism adapted to low-oxygen environments. Its unique traits suggest it may play a role in specific ecological interactions or biogeochemical cycles, particularly in the degradation of organic matter in anaerobic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyRhodocyclaceae
GenusPropionivibrio
SpeciesPropionivibrio dicarboxylicus
Strainstrain DSM 5885

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Propionivibrio dicarboxylicus strain DSM 5885 genome assembly,

Gene Summary

Adenine Count

893779 bp

Thymine Count

861526 bp

Guanine Count

1365404 bp

Cytosine Count

1413342 bp

Genome Length

4534676 bp

Protein-coding Genes

4009 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate kinaseSAMN05660652_03732Not AvailablePositive4076530 - 407706620119.3
3-dehydroquinate synthaseSAMN05660652_03733Not AvailablePositive4077054 - 407813639273.8
nad(p) transhydrogenase subunit betaSAMN05660652_03734Not AvailableNegative4078208 - 407962649213.8
nad(p) transhydrogenase subunit alphaSAMN05660652_03735Not AvailableNegative4079640 - 408122955266.6
glutamate synthase (nadph/nadh) large chainSAMN05660652_03736Not AvailablePositive4081739 - 4086421170435.0
glutamate synthase (nadh) small subunitSAMN05660652_03737Not AvailablePositive4086422 - 408788852869.2
hypothetical proteinSAMN05660652_03738Not AvailablePositive4088001 - 408874127269.2
bifunctional udp-n-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate n-acetyltransferaseSAMN05660652_03739Not AvailablePositive4088817 - 409016948197.9
glucosamine--fructose-6-phosphate aminotransferase (isomerizing)SAMN05660652_03740Not AvailablePositive4090226 - 409205566003.4
gtp-binding protein hflxSAMN05660652_03741Not AvailableNegative4092315 - 409366149849.6

Displaying genes 3721 – 3730 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.