Propionivibrio dicarboxylicus strain DSM 5885

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Rhodocyclaceae

Genus

Propionivibrio

Description

Propionivibrio dicarboxylicus strain DSM 5885 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This trait is crucial for its metabolic processes and ecological niche, as it suggests the organism may inhabit anaerobic environments, such as sediments or the gastrointestinal tracts of certain animals. The strain is characterized by a single replicon, which means it has a singular circular chromosome that carries the genetic information necessary for its survival and reproduction. This genetic structure can affect its adaptability and evolutionary strategies in response to environmental changes. The accession number for Propionivibrio dicarboxylicus strain DSM 5885 is FNCY00000000.1, which is vital for researchers looking to access its genomic data in biological databases. This information can facilitate further studies on its genetics, metabolism, and potential applications in biotechnology or microbiology. In summary, the anaerobic nature of Propionivibrio dicarboxylicus strain DSM 5885, along with its single replicon, positions it as a specialized organism adapted to low-oxygen environments. Its unique traits suggest it may play a role in specific ecological interactions or biogeochemical cycles, particularly in the degradation of organic matter in anaerobic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyRhodocyclaceae
GenusPropionivibrio
SpeciesPropionivibrio dicarboxylicus
Strainstrain DSM 5885

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Propionivibrio dicarboxylicus strain DSM 5885 genome assembly,

Gene Summary

Adenine Count

893779 bp

Thymine Count

861526 bp

Guanine Count

1365404 bp

Cytosine Count

1413342 bp

Genome Length

4534676 bp

Protein-coding Genes

4009 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isoquinoline 1-oxidoreductase, beta subunitSAMN05660652_03113Not AvailableNegative3411545 - 341378879968.0
isoquinoline 1-oxidoreductase, alpha subunitSAMN05660652_03114Not AvailableNegative3413785 - 341427617325.0
nramp (natural resistance-associated macrophage protein) metal ion transportersSAMN05660652_03115Not AvailableNegative3414445 - 341572245126.9
ribonuclease hiSAMN05660652_03116Not AvailableNegative3416336 - 341698623427.4
hypothetical proteinSAMN05660652_03117Not AvailableNegative3417203 - 341828838973.4
inner membrane proteinSAMN05660652_03118Not AvailableNegative3418356 - 341885318158.9
predicted lipoprotein with conserved yx(fwy)xxd motifSAMN05660652_03119Not AvailablePositive3419194 - 341958313482.9
rna polymerase sigma-70 factor, ecf subfamilySAMN05660652_03120Not AvailablePositive3419589 - 342008918692.8
transmembrane transcriptional regulator (anti-sigma factor rsiw)SAMN05660652_03121Not AvailablePositive3420086 - 342089529953.5
two-component system, chemotaxis family, response regulator chebSAMN05660652_03122Not AvailableNegative3421002 - 342210840061.0

Displaying genes 3161 – 3170 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.