Propionivibrio dicarboxylicus strain DSM 5885

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Rhodocyclaceae

Genus

Propionivibrio

Description

Propionivibrio dicarboxylicus strain DSM 5885 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This trait is crucial for its metabolic processes and ecological niche, as it suggests the organism may inhabit anaerobic environments, such as sediments or the gastrointestinal tracts of certain animals. The strain is characterized by a single replicon, which means it has a singular circular chromosome that carries the genetic information necessary for its survival and reproduction. This genetic structure can affect its adaptability and evolutionary strategies in response to environmental changes. The accession number for Propionivibrio dicarboxylicus strain DSM 5885 is FNCY00000000.1, which is vital for researchers looking to access its genomic data in biological databases. This information can facilitate further studies on its genetics, metabolism, and potential applications in biotechnology or microbiology. In summary, the anaerobic nature of Propionivibrio dicarboxylicus strain DSM 5885, along with its single replicon, positions it as a specialized organism adapted to low-oxygen environments. Its unique traits suggest it may play a role in specific ecological interactions or biogeochemical cycles, particularly in the degradation of organic matter in anaerobic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyRhodocyclaceae
GenusPropionivibrio
SpeciesPropionivibrio dicarboxylicus
Strainstrain DSM 5885

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Propionivibrio dicarboxylicus strain DSM 5885 genome assembly,

Gene Summary

Adenine Count

893779 bp

Thymine Count

861526 bp

Guanine Count

1365404 bp

Cytosine Count

1413342 bp

Genome Length

4534676 bp

Protein-coding Genes

4009 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two component transcriptional regulator, luxr familySAMN05660652_02823Not AvailableNegative3084335 - 308494922423.2
two-component system, luxr family, sensor histidine kinase dctsSAMN05660652_02824Not AvailableNegative3084946 - 308694975254.2
oxaloacetate decarboxylase, beta subunitSAMN05660652_02825Not AvailableNegative3087171 - 308829839311.9
biotin-requiring enzymeSAMN05660652_02826Not AvailableNegative3088300 - 30885217465.19
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05660652_02827Not AvailablePositive3088522 - 308916823250.0
succinate dehydrogenase/fumarate reductase, flavoprotein subunitSAMN05660652_02828Not AvailablePositive3089173 - 309125476196.9
pas domain s-box-containing protein/hemerythrin-like metal-binding domain proteinSAMN05660652_02829Not AvailableNegative3091465 - 3094767124020.0
dna-binding transcriptional regulator, lrp familySAMN05660652_02830Not AvailableNegative3095173 - 309563117171.9
protein of unknown functionSAMN05660652_02831Not AvailablePositive3095808 - 30960478528.09
hypothetical chaperone proteinSAMN05660652_02832Not AvailableNegative3096169 - 309743446522.5

Displaying genes 2871 – 2880 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.