Propionivibrio dicarboxylicus strain DSM 5885

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Rhodocyclaceae

Genus

Propionivibrio

Description

Propionivibrio dicarboxylicus strain DSM 5885 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This trait is crucial for its metabolic processes and ecological niche, as it suggests the organism may inhabit anaerobic environments, such as sediments or the gastrointestinal tracts of certain animals. The strain is characterized by a single replicon, which means it has a singular circular chromosome that carries the genetic information necessary for its survival and reproduction. This genetic structure can affect its adaptability and evolutionary strategies in response to environmental changes. The accession number for Propionivibrio dicarboxylicus strain DSM 5885 is FNCY00000000.1, which is vital for researchers looking to access its genomic data in biological databases. This information can facilitate further studies on its genetics, metabolism, and potential applications in biotechnology or microbiology. In summary, the anaerobic nature of Propionivibrio dicarboxylicus strain DSM 5885, along with its single replicon, positions it as a specialized organism adapted to low-oxygen environments. Its unique traits suggest it may play a role in specific ecological interactions or biogeochemical cycles, particularly in the degradation of organic matter in anaerobic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyRhodocyclaceae
GenusPropionivibrio
SpeciesPropionivibrio dicarboxylicus
Strainstrain DSM 5885

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Propionivibrio dicarboxylicus strain DSM 5885 genome assembly,

Gene Summary

Adenine Count

893779 bp

Thymine Count

861526 bp

Guanine Count

1365404 bp

Cytosine Count

1413342 bp

Genome Length

4534676 bp

Protein-coding Genes

4009 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alkaline phosphataseSAMN05660652_02018Not AvailableNegative2181997 - 218339149378.6
ribosomal protein s18 acetylase rimiSAMN05660652_02019Not AvailableNegative2183444 - 218389016218.4
branched-chain amino acid transport system substrate-binding proteinSAMN05660652_02020Not AvailablePositive2184113 - 218522838727.5
amino acid/amide abc transporter membrane protein 1, haat familySAMN05660652_02021Not AvailablePositive2185314 - 218622232019.3
branched-chain amino acid transport system permease proteinSAMN05660652_02022Not AvailablePositive2186227 - 218747745598.7
amino acid/amide abc transporter atp-binding protein 1, haat family (tc 3.a.1.4.-)SAMN05660652_02023Not AvailablePositive2187467 - 218826729128.5
amino acid/amide abc transporter atp-binding protein 2, haat familySAMN05660652_02024Not AvailablePositive2188260 - 218896725861.6
hdod domain-containing proteinSAMN05660652_02025Not AvailableNegative2189075 - 219053253061.3
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05660652_02026Not AvailableNegative2190695 - 2194219130055.0
enolaseSAMN05660652_02027Not AvailableNegative2194416 - 219598455215.6

Displaying genes 2071 – 2080 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.