Propionivibrio dicarboxylicus strain DSM 5885

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Rhodocyclaceae

Genus

Propionivibrio

Description

Propionivibrio dicarboxylicus strain DSM 5885 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This trait is crucial for its metabolic processes and ecological niche, as it suggests the organism may inhabit anaerobic environments, such as sediments or the gastrointestinal tracts of certain animals. The strain is characterized by a single replicon, which means it has a singular circular chromosome that carries the genetic information necessary for its survival and reproduction. This genetic structure can affect its adaptability and evolutionary strategies in response to environmental changes. The accession number for Propionivibrio dicarboxylicus strain DSM 5885 is FNCY00000000.1, which is vital for researchers looking to access its genomic data in biological databases. This information can facilitate further studies on its genetics, metabolism, and potential applications in biotechnology or microbiology. In summary, the anaerobic nature of Propionivibrio dicarboxylicus strain DSM 5885, along with its single replicon, positions it as a specialized organism adapted to low-oxygen environments. Its unique traits suggest it may play a role in specific ecological interactions or biogeochemical cycles, particularly in the degradation of organic matter in anaerobic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyRhodocyclaceae
GenusPropionivibrio
SpeciesPropionivibrio dicarboxylicus
Strainstrain DSM 5885

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Propionivibrio dicarboxylicus strain DSM 5885 genome assembly,

Gene Summary

Adenine Count

893779 bp

Thymine Count

861526 bp

Guanine Count

1365404 bp

Cytosine Count

1413342 bp

Genome Length

4534676 bp

Protein-coding Genes

4009 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobalt-zinc-cadmium resistance protein czcaSAMN05660652_02008Not AvailablePositive2169045 - 2172149112114.0
nitrogen regulatory protein p-ii familySAMN05660652_02009Not AvailablePositive2172192 - 217253912479.2
methyl-accepting chemotaxis proteinSAMN05660652_02010Not AvailablePositive2172929 - 217424245974.7
l-asparaginaseSAMN05660652_02011Not AvailablePositive2174324 - 217483618310.1
predicted arabinose efflux permease, mfs familySAMN05660652_02012Not AvailableNegative2174937 - 217609741358.8
dipeptidase dSAMN05660652_02013Not AvailableNegative2176094 - 217757551256.6
alanine dehydrogenaseSAMN05660652_02014Not AvailableNegative2177717 - 217883238290.5
uncharacterized membrane proteinSAMN05660652_02015Not AvailablePositive2178965 - 217942016476.3
23s rrna (cytosine1962-c5)-methyltransferaseSAMN05660652_02016Not AvailablePositive2179449 - 218063942906.2
tagaturonate epimeraseSAMN05660652_02017Not AvailableNegative2180676 - 218192945731.6

Displaying genes 2061 – 2070 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.