Propionivibrio dicarboxylicus strain DSM 5885

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Rhodocyclaceae

Genus

Propionivibrio

Description

Propionivibrio dicarboxylicus strain DSM 5885 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This trait is crucial for its metabolic processes and ecological niche, as it suggests the organism may inhabit anaerobic environments, such as sediments or the gastrointestinal tracts of certain animals. The strain is characterized by a single replicon, which means it has a singular circular chromosome that carries the genetic information necessary for its survival and reproduction. This genetic structure can affect its adaptability and evolutionary strategies in response to environmental changes. The accession number for Propionivibrio dicarboxylicus strain DSM 5885 is FNCY00000000.1, which is vital for researchers looking to access its genomic data in biological databases. This information can facilitate further studies on its genetics, metabolism, and potential applications in biotechnology or microbiology. In summary, the anaerobic nature of Propionivibrio dicarboxylicus strain DSM 5885, along with its single replicon, positions it as a specialized organism adapted to low-oxygen environments. Its unique traits suggest it may play a role in specific ecological interactions or biogeochemical cycles, particularly in the degradation of organic matter in anaerobic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyRhodocyclaceae
GenusPropionivibrio
SpeciesPropionivibrio dicarboxylicus
Strainstrain DSM 5885

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Propionivibrio dicarboxylicus strain DSM 5885 genome assembly,

Gene Summary

Adenine Count

893779 bp

Thymine Count

861526 bp

Guanine Count

1365404 bp

Cytosine Count

1413342 bp

Genome Length

4534676 bp

Protein-coding Genes

4009 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna recombination protein rmucSAMN05660652_01747Not AvailablePositive1900757 - 190210349713.5
protein of unknown functionSAMN05660652_01748Not AvailablePositive1902100 - 190253415368.1
serine/threonine protein kinaseSAMN05660652_01749Not AvailablePositive1902568 - 190496487465.4
beta-barrel assembly machine subunit bamdSAMN05660652_01750Not AvailableNegative1904998 - 190579230388.3
23s rrna pseudouridine1911/1915/1917 synthaseSAMN05660652_01751Not AvailablePositive1905995 - 190691534130.5
conserved hypothetical proteinSAMN05660652_01752Not AvailablePositive1906875 - 190765427643.0
branched-chain amino acid transport system atp-binding proteinSAMN05660652_01753Not AvailableNegative1907668 - 190837525173.7
amino acid/amide abc transporter atp-binding protein 1, haat familySAMN05660652_01754Not AvailableNegative1908376 - 190914028244.7
amino acid/amide abc transporter membrane protein 2, haat familySAMN05660652_01755Not AvailableNegative1909137 - 191021938945.9
amino acid/amide abc transporter membrane protein 1, haat familySAMN05660652_01756Not AvailableNegative1910219 - 191111231843.3

Displaying genes 1801 – 1810 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.