Propionivibrio dicarboxylicus strain DSM 5885

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Rhodocyclaceae

Genus

Propionivibrio

Description

Propionivibrio dicarboxylicus strain DSM 5885 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This trait is crucial for its metabolic processes and ecological niche, as it suggests the organism may inhabit anaerobic environments, such as sediments or the gastrointestinal tracts of certain animals. The strain is characterized by a single replicon, which means it has a singular circular chromosome that carries the genetic information necessary for its survival and reproduction. This genetic structure can affect its adaptability and evolutionary strategies in response to environmental changes. The accession number for Propionivibrio dicarboxylicus strain DSM 5885 is FNCY00000000.1, which is vital for researchers looking to access its genomic data in biological databases. This information can facilitate further studies on its genetics, metabolism, and potential applications in biotechnology or microbiology. In summary, the anaerobic nature of Propionivibrio dicarboxylicus strain DSM 5885, along with its single replicon, positions it as a specialized organism adapted to low-oxygen environments. Its unique traits suggest it may play a role in specific ecological interactions or biogeochemical cycles, particularly in the degradation of organic matter in anaerobic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyRhodocyclaceae
GenusPropionivibrio
SpeciesPropionivibrio dicarboxylicus
Strainstrain DSM 5885

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Propionivibrio dicarboxylicus strain DSM 5885 genome assembly,

Gene Summary

Adenine Count

893779 bp

Thymine Count

861526 bp

Guanine Count

1365404 bp

Cytosine Count

1413342 bp

Genome Length

4534676 bp

Protein-coding Genes

4009 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exodeoxyribonuclease vii small subunitSAMN05660652_01247Not AvailablePositive1344543 - 134482410251.1
farnesyl diphosphate synthaseSAMN05660652_01248Not AvailablePositive1344821 - 134574132692.5
1-deoxy-d-xylulose-5-phosphate synthaseSAMN05660652_01249Not AvailablePositive1345778 - 134764367179.8
gtp cyclohydrolase iSAMN05660652_01250Not AvailablePositive1347640 - 134847331365.5
lrp/asnc family transcriptional regulatorSAMN05660652_01251Not AvailablePositive1348473 - 134894318056.7
l-cysteine desulfidaseSAMN05660652_01252Not AvailableNegative1348977 - 135026644402.8
lsu ribosomal protein l19pSAMN05660652_01253Not AvailableNegative1350434 - 135081414310.4
trna (guanine37-n1)-methyltransferaseSAMN05660652_01254Not AvailableNegative1350792 - 135162831094.1
16s rrna processing protein rimmSAMN05660652_01255Not AvailableNegative1351625 - 135213118458.1
small subunit ribosomal protein s16SAMN05660652_01256Not AvailableNegative1352187 - 13524419322.38

Displaying genes 1331 – 1340 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.