Psychroflexus sediminis strain DSM 19803

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Psychroflexus

Description

Psychroflexus sediminis strain DSM 19803 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and does not form spores. It has been classified as mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperature conditions. The genetic makeup of Psychroflexus sediminis includes a single replicon, which is relevant for understanding its genomic structure and replication processes. The strain is cataloged under the accession number FNCW00000000.1, providing a reference for its genetic sequence in microbial databases. The ecological significance of Psychroflexus sediminis may be linked to its adaptation to specific environmental conditions, particularly in sedimentary habitats where mesophilic, aerobic organisms thrive. Its non-motile nature suggests that it may rely on nutrient diffusion or other passive mechanisms for survival. This adaptability could play a role in nutrient cycling and organic matter decomposition within its ecosystem, contributing to the overall dynamics of microbial communities in sedimentary environments. Understanding the traits of Psychroflexus sediminis can enhance our knowledge of microbial diversity and functionality in ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPsychroflexus
SpeciesPsychroflexus sediminis
Strainstrain DSM 19803

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychroflexus sediminis strain DSM 19803 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2663 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development)SAMN04488027_12016Not AvailablePositive2867296 - 286845944007.6
protein involved in gliding motility gldhSAMN04488027_12017Not AvailablePositive2868446 - 286894319153.9
penicillin-binding protein 1aSAMN04488027_12018Not AvailablePositive2868961 - 287128587904.9
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthaseSAMN04488027_12019Not AvailableNegative2871282 - 287173416845.2
integrase core domain-containing proteinSAMN04488027_1211Not AvailablePositive2872000 - 287235913640.2
hypothetical proteinSAMN04488027_1212Not AvailablePositive2872962 - 28731838557.06
bacterial peptide chain release factor 3 (brf-3)SAMN04488027_1214Not AvailableNegative2873296 - 287488260419.3
c-terminal domain of chu protein family proteinSAMN04488027_1215Not AvailablePositive2875008 - 2879219149494.0
type ix secretion system membrane protein, porp/sprf familySAMN04488027_1216Not AvailablePositive2879226 - 288016735038.9
outer membrane protein ompaSAMN04488027_1217Not AvailablePositive2880171 - 288247787921.5

Displaying genes 2611 – 2620 of 2708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.