Psychroflexus sediminis strain DSM 19803

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Psychroflexus

Description

Psychroflexus sediminis strain DSM 19803 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and does not form spores. It has been classified as mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperature conditions. The genetic makeup of Psychroflexus sediminis includes a single replicon, which is relevant for understanding its genomic structure and replication processes. The strain is cataloged under the accession number FNCW00000000.1, providing a reference for its genetic sequence in microbial databases. The ecological significance of Psychroflexus sediminis may be linked to its adaptation to specific environmental conditions, particularly in sedimentary habitats where mesophilic, aerobic organisms thrive. Its non-motile nature suggests that it may rely on nutrient diffusion or other passive mechanisms for survival. This adaptability could play a role in nutrient cycling and organic matter decomposition within its ecosystem, contributing to the overall dynamics of microbial communities in sedimentary environments. Understanding the traits of Psychroflexus sediminis can enhance our knowledge of microbial diversity and functionality in ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPsychroflexus
SpeciesPsychroflexus sediminis
Strainstrain DSM 19803

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychroflexus sediminis strain DSM 19803 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2663 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domainsSAMN04488027_11243Not AvailablePositive2523304 - 252422135912.3
glutamate carboxypeptidaseSAMN04488027_11244Not AvailablePositive2524366 - 252565246234.6
succinate dehydrogenase / fumarate reductase iron-sulfur subunitSAMN04488027_11245Not AvailableNegative2525781 - 252652727064.9
succinate dehydrogenase subunit aSAMN04488027_11246Not AvailableNegative2526535 - 252853874854.4
succinate dehydrogenase / fumarate reductase cytochrome b subunitSAMN04488027_11247Not AvailableNegative2528550 - 252924826398.4
xaa-pro aminopeptidaseSAMN04488027_11248Not AvailablePositive2529467 - 253075949717.3
pimeloyl-acp methyl ester carboxylesteraseSAMN04488027_11249Not AvailablePositive2530806 - 253159729740.3
dgtpaseSAMN04488027_11250Not AvailableNegative2532138 - 253348450729.1
hypothetical proteinSAMN04488027_11251Not AvailableNegative2533565 - 253393613902.6
predicted rna binding protein ycfa, dsrbd-like fold, hica-like mrna interferase familySAMN04488027_11252Not AvailableNegative2533961 - 25341767936.03

Displaying genes 2291 – 2300 of 2708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.