Psychroflexus sediminis strain DSM 19803

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Psychroflexus

Description

Psychroflexus sediminis strain DSM 19803 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and does not form spores. It has been classified as mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperature conditions. The genetic makeup of Psychroflexus sediminis includes a single replicon, which is relevant for understanding its genomic structure and replication processes. The strain is cataloged under the accession number FNCW00000000.1, providing a reference for its genetic sequence in microbial databases. The ecological significance of Psychroflexus sediminis may be linked to its adaptation to specific environmental conditions, particularly in sedimentary habitats where mesophilic, aerobic organisms thrive. Its non-motile nature suggests that it may rely on nutrient diffusion or other passive mechanisms for survival. This adaptability could play a role in nutrient cycling and organic matter decomposition within its ecosystem, contributing to the overall dynamics of microbial communities in sedimentary environments. Understanding the traits of Psychroflexus sediminis can enhance our knowledge of microbial diversity and functionality in ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPsychroflexus
SpeciesPsychroflexus sediminis
Strainstrain DSM 19803

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychroflexus sediminis strain DSM 19803 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2663 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative efflux protein, mate familySAMN04488027_11094Not AvailableNegative2341805 - 234315149460.9
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseSAMN04488027_11095Not AvailableNegative2343141 - 234442447582.9
protein involved in gliding motility gldjSAMN04488027_11096Not AvailableNegative2344489 - 234613562770.0
por secretion system c-terminal sorting domain-containing proteinSAMN04488027_11097Not AvailablePositive2346305 - 2350135143102.0
hypothetical proteinSAMN04488027_11098Not AvailablePositive2350113 - 235133345369.2
cytidine deaminaseSAMN04488027_11099Not AvailablePositive2351412 - 235189417311.7
pyruvate dehydrogenase e1 component alpha subunitSAMN04488027_110100Not AvailablePositive2351980 - 235297837816.5
pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase)SAMN04488027_110101Not AvailablePositive2352983 - 235468961513.7
peptidase family m28SAMN04488027_110102Not AvailablePositive2354769 - 235573736300.6
short-chain dehydrogenaseSAMN04488027_110103Not AvailablePositive2355737 - 235642024583.1

Displaying genes 2131 – 2140 of 2708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.