Psychroflexus sediminis strain DSM 19803

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Psychroflexus

Description

Psychroflexus sediminis strain DSM 19803 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and does not form spores. It has been classified as mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperature conditions. The genetic makeup of Psychroflexus sediminis includes a single replicon, which is relevant for understanding its genomic structure and replication processes. The strain is cataloged under the accession number FNCW00000000.1, providing a reference for its genetic sequence in microbial databases. The ecological significance of Psychroflexus sediminis may be linked to its adaptation to specific environmental conditions, particularly in sedimentary habitats where mesophilic, aerobic organisms thrive. Its non-motile nature suggests that it may rely on nutrient diffusion or other passive mechanisms for survival. This adaptability could play a role in nutrient cycling and organic matter decomposition within its ecosystem, contributing to the overall dynamics of microbial communities in sedimentary environments. Understanding the traits of Psychroflexus sediminis can enhance our knowledge of microbial diversity and functionality in ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPsychroflexus
SpeciesPsychroflexus sediminis
Strainstrain DSM 19803

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychroflexus sediminis strain DSM 19803 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2663 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized membrane protein yeihSAMN04488027_108124Not AvailablePositive2076169 - 207679823196.2
peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin familySAMN04488027_108125Not AvailableNegative2076801 - 207752027224.2
nudix domain-containing proteinSAMN04488027_108126Not AvailablePositive2077529 - 207814323191.0
1-acyl-sn-glycerol-3-phosphate acyltransferaseSAMN04488027_108127Not AvailablePositive2078183 - 207900131373.2
alcohol dehydrogenase (nadp+)SAMN04488027_108128Not AvailablePositive2079088 - 208003836057.6
pp_01855SAMN04488027_108129Not AvailableNegative2080218 - 2080799Not Available
dna polymerase-3 subunit gamma/tauSAMN04488027_108130Not AvailableNegative2080805 - 208266169847.0
uncharacterized membrane protein yqae, homolog of blt101, upf0057 familySAMN04488027_108131Not AvailableNegative2082788 - 20829616312.19
tricorn proteaseSAMN04488027_108132Not AvailablePositive2083116 - 2086370122708.0
acetyltransferase (gnat) family proteinSAMN04488027_108133Not AvailableNegative2086442 - 208696019706.6

Displaying genes 1881 – 1890 of 2708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.