Psychroflexus sediminis strain DSM 19803

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Psychroflexus

Description

Psychroflexus sediminis strain DSM 19803 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and does not form spores. It has been classified as mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperature conditions. The genetic makeup of Psychroflexus sediminis includes a single replicon, which is relevant for understanding its genomic structure and replication processes. The strain is cataloged under the accession number FNCW00000000.1, providing a reference for its genetic sequence in microbial databases. The ecological significance of Psychroflexus sediminis may be linked to its adaptation to specific environmental conditions, particularly in sedimentary habitats where mesophilic, aerobic organisms thrive. Its non-motile nature suggests that it may rely on nutrient diffusion or other passive mechanisms for survival. This adaptability could play a role in nutrient cycling and organic matter decomposition within its ecosystem, contributing to the overall dynamics of microbial communities in sedimentary environments. Understanding the traits of Psychroflexus sediminis can enhance our knowledge of microbial diversity and functionality in ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPsychroflexus
SpeciesPsychroflexus sediminis
Strainstrain DSM 19803

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychroflexus sediminis strain DSM 19803 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2663 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zip zinc transporterSAMN04488027_106153Not AvailablePositive1715982 - 171664724301.6
dihydrolipoamide dehydrogenaseSAMN04488027_106154Not AvailablePositive1716728 - 171811949894.1
rna methyltransferase, trmh familySAMN04488027_106155Not AvailablePositive1718188 - 171897929140.2
peptidase family m23SAMN04488027_106156Not AvailablePositive1719007 - 172070764986.3
outer membrane receptor proteins, mostly fe transportSAMN04488027_106157Not AvailablePositive1720719 - 172317593511.9
cysteine desulfuraseSAMN04488027_106158Not AvailableNegative1723161 - 172431842201.4
hypothetical proteinSAMN04488027_106159Not AvailablePositive1724401 - 172537235628.4
uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domainsSAMN04488027_106160Not AvailableNegative1725365 - 172680154947.5
hypothetical proteinSAMN04488027_106161Not AvailableNegative1726805 - 172723016508.3
arginyl-trna synthetaseSAMN04488027_106162Not AvailablePositive1727320 - 172909867820.9

Displaying genes 1571 – 1580 of 2708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.