Bradyrhizobium sp. Rc2d

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium sp. Rc2d is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in diverse environments. This strain is notable for having a single replicon, indicating a straightforward genetic organization that can be advantageous for stability and replication under various conditions. The strain is cataloged under the accession number FNCU00000000.1, which provides a reference point for researchers examining its genetic and functional attributes. As a member of the Bradyrhizobium genus, Rc2d is likely involved in symbiotic relationships with leguminous plants, contributing to nitrogen fixation processes that are crucial for soil fertility and plant growth. Understanding the traits of Bradyrhizobium sp. Rc2d, particularly its motility and genetic structure, can provide insights into its ecological roles and potential applications in agriculture. The capability of this bacterium to form symbiotic associations suggests that it may enhance nutrient availability in soils, promoting sustainable agricultural practices. Further research could elucidate the specific interactions between this bacterium and plant hosts, as well as its overall impact on soil health and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium sp. Rc2d
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium sp. Rc2d genome assembly, contig: Ga0075234_1117,

Gene Summary

Adenine Count

1779794 bp

Thymine Count

1780751 bp

Guanine Count

3004414 bp

Cytosine Count

3012982 bp

Genome Length

9578216 bp

Protein-coding Genes

9133 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gntr family transcriptional regulatorSAMN05216338_106821Not AvailableNegative8835640 - 883636227393.8
choline dehydrogenaseSAMN05216338_106822Not AvailableNegative8836391 - 883798657948.1
l-alanine-dl-glutamate epimeraseSAMN05216338_106823Not AvailableNegative8837986 - 883911340296.6
nitt/taut family transport system permease proteinSAMN05216338_106824Not AvailablePositive8839220 - 883999028220.7
nitt/taut family transport system atp-binding proteinSAMN05216338_106825Not AvailablePositive8839987 - 884079630024.3
nitt/taut family transport system substrate-binding proteinSAMN05216338_106826Not AvailablePositive8840819 - 884181436040.1
uncharacterized conserved protein, contains a c-terminal beta-barrel porin domainSAMN05216338_106827Not AvailableNegative8842353 - 8846216125102.0
transcriptional regulatory protein, c terminalSAMN05216338_106828Not AvailableNegative8846494 - 884808057465.2
transposaseSAMN05216338_106829Not AvailablePositive8848488 - 884924929014.0
bifunctional non-homologous end joining protein ligdSAMN05216338_106830Not AvailablePositive8851075 - 885140112292.2

Displaying genes 8451 – 8460 of 9196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.