Bradyrhizobium sp. Rc2d

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium sp. Rc2d is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in diverse environments. This strain is notable for having a single replicon, indicating a straightforward genetic organization that can be advantageous for stability and replication under various conditions. The strain is cataloged under the accession number FNCU00000000.1, which provides a reference point for researchers examining its genetic and functional attributes. As a member of the Bradyrhizobium genus, Rc2d is likely involved in symbiotic relationships with leguminous plants, contributing to nitrogen fixation processes that are crucial for soil fertility and plant growth. Understanding the traits of Bradyrhizobium sp. Rc2d, particularly its motility and genetic structure, can provide insights into its ecological roles and potential applications in agriculture. The capability of this bacterium to form symbiotic associations suggests that it may enhance nutrient availability in soils, promoting sustainable agricultural practices. Further research could elucidate the specific interactions between this bacterium and plant hosts, as well as its overall impact on soil health and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium sp. Rc2d
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium sp. Rc2d genome assembly, contig: Ga0075234_1117,

Gene Summary

Adenine Count

1779794 bp

Thymine Count

1780751 bp

Guanine Count

3004414 bp

Cytosine Count

3012982 bp

Genome Length

9578216 bp

Protein-coding Genes

9133 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN05216338_1009120Not AvailableNegative3053116 - 305414437915.3
putative transposaseSAMN05216338_1009121Not AvailableNegative3054316 - 30544294155.13
branched-chain amino acid transport system substrate-binding proteinSAMN05216338_1009122Not AvailableNegative3054701 - 305581338988.1
nodulation repressor nolaSAMN05216338_1009123Not AvailableNegative3056149 - 305672121534.0
transcriptional regulator nodd2SAMN05216338_1009124Not AvailableNegative3057766 - 305870735231.9
transcriptional regulator noddSAMN05216338_1009125Not AvailableNegative3059396 - 306034035938.2
hypothetical proteinSAMN05216338_1009126Not AvailablePositive3060453 - 306113325333.7
beta-1,4-n-acetylglucosamine oligosaccharide n-acyltransferase nodaSAMN05216338_1009127Not AvailablePositive3061175 - 306180723208.1
beta-1,4-n-acetylglucosamine oligosaccharide deacetylase nodbSAMN05216338_1009128Not AvailablePositive3061804 - 306246324174.0
beta-1,4-n-acetylglucosaminyltransferase nodcSAMN05216338_1009129Not AvailablePositive3062481 - 306385749644.1

Displaying genes 2861 – 2870 of 9196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.