Bradyrhizobium sp. Rc2d

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium sp. Rc2d is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in diverse environments. This strain is notable for having a single replicon, indicating a straightforward genetic organization that can be advantageous for stability and replication under various conditions. The strain is cataloged under the accession number FNCU00000000.1, which provides a reference point for researchers examining its genetic and functional attributes. As a member of the Bradyrhizobium genus, Rc2d is likely involved in symbiotic relationships with leguminous plants, contributing to nitrogen fixation processes that are crucial for soil fertility and plant growth. Understanding the traits of Bradyrhizobium sp. Rc2d, particularly its motility and genetic structure, can provide insights into its ecological roles and potential applications in agriculture. The capability of this bacterium to form symbiotic associations suggests that it may enhance nutrient availability in soils, promoting sustainable agricultural practices. Further research could elucidate the specific interactions between this bacterium and plant hosts, as well as its overall impact on soil health and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium sp. Rc2d
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium sp. Rc2d genome assembly, contig: Ga0075234_1117,

Gene Summary

Adenine Count

1779794 bp

Thymine Count

1780751 bp

Guanine Count

3004414 bp

Cytosine Count

3012982 bp

Genome Length

9578216 bp

Protein-coding Genes

9133 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilus assembly protein cpabSAMN05216338_100313Not AvailableNegative1314619 - 131541627965.6
prepilin peptidase cpaaSAMN05216338_100314Not AvailableNegative1315545 - 131606918531.2
hypothetical proteinSAMN05216338_100315Not AvailableNegative1316189 - 13163355121.21
pilus assembly protein flp/pilaSAMN05216338_100316Not AvailableNegative1316407 - 13165715541.77
sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilySAMN05216338_100317Not AvailablePositive1316838 - 131766531260.1
pilus formation protein n terminal regionSAMN05216338_100318Not AvailablePositive1317831 - 131832817357.1
cold-shock dna-binding protein familySAMN05216338_100319Not AvailableNegative1318559 - 13187657229.47
bacterial translation initiation factor 1 (bif-1)SAMN05216338_100320Not AvailableNegative1319038 - 131932510808.1
atp-dependent rna helicase rhleSAMN05216338_100321Not AvailableNegative1319349 - 132093257529.9
amino acid/amide abc transporter substrate-binding protein, haat familySAMN05216338_100322Not AvailablePositive1321413 - 132274148209.8

Displaying genes 1261 – 1270 of 9196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.