Pseudomonas benzenivorans strain DSM 8628

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas benzenivorans strain DSM 8628 is a distinct bacterial strain characterized by its single replicon, which contributes to its genomic stability. The strain is cataloged under the accession number FNCT00000000.1, facilitating its identification and study within microbial databases. This bacterium is of particular interest due to its capacity to metabolize aromatic compounds, specifically benzene. Such metabolic capabilities suggest that Pseudomonas benzenivorans DSM 8628 plays a significant role in bioremediation, particularly in environments contaminated with aromatic hydrocarbons. The ability of this strain to degrade benzene could be vital for the detoxification of polluted sites, thereby contributing to ecological health. Understanding the metabolic pathways utilized by Pseudomonas benzenivorans could provide insights into its ecological niche and its potential applications in environmental biotechnology. By harnessing its natural abilities, researchers may develop strategies for employing this strain in bioremediation efforts, promoting a cleaner environment by mitigating the impact of industrial pollutants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas benzenivorans
Strainstrain DSM 8628

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas benzenivorans strain DSM 8628
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas benzenivorans strain DSM 8628 genome assembly, contig:

Gene Summary

Adenine Count

999054 bp

Thymine Count

999127 bp

Guanine Count

1872356 bp

Cytosine Count

1872307 bp

Genome Length

5743144 bp

Protein-coding Genes

5188 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfur-oxidizing protein soxySAMN05216603_110117Not AvailableNegative3751245 - 375200027832.2
abc-type amino acid transport substrate-binding proteinSAMN05216603_110118Not AvailableNegative3752068 - 375297034190.9
cytochrome c-550 pedfSAMN05216603_110119Not AvailableNegative3752976 - 375339515284.1
hypothetical proteinSAMN05216603_110120Not AvailableNegative3753666 - 375410316219.8
abc transporter, substrate binding protein, pqq-dependent alcohol dehydrogenase systemSAMN05216603_110121Not AvailablePositive3754263 - 375545343515.5
pqq-dependent catabolism-associated beta-propeller proteinSAMN05216603_110122Not AvailablePositive3755538 - 375650334826.5
abc-2 type transport system atp-binding proteinSAMN05216603_110123Not AvailablePositive3756500 - 375722826295.7
abc-2 type transport system permease proteinSAMN05216603_110124Not AvailablePositive3757470 - 375826129417.1
pqq-dependent catabolism-associated cxxcw motif proteinSAMN05216603_110125Not AvailablePositive3758530 - 375908120619.4
two component transcriptional regulator, luxr familySAMN05216603_110126Not AvailablePositive3759145 - 375981024353.4

Displaying genes 3451 – 3460 of 5255 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.