Pseudomonas benzenivorans strain DSM 8628

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas benzenivorans strain DSM 8628 is a distinct bacterial strain characterized by its single replicon, which contributes to its genomic stability. The strain is cataloged under the accession number FNCT00000000.1, facilitating its identification and study within microbial databases. This bacterium is of particular interest due to its capacity to metabolize aromatic compounds, specifically benzene. Such metabolic capabilities suggest that Pseudomonas benzenivorans DSM 8628 plays a significant role in bioremediation, particularly in environments contaminated with aromatic hydrocarbons. The ability of this strain to degrade benzene could be vital for the detoxification of polluted sites, thereby contributing to ecological health. Understanding the metabolic pathways utilized by Pseudomonas benzenivorans could provide insights into its ecological niche and its potential applications in environmental biotechnology. By harnessing its natural abilities, researchers may develop strategies for employing this strain in bioremediation efforts, promoting a cleaner environment by mitigating the impact of industrial pollutants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas benzenivorans
Strainstrain DSM 8628

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas benzenivorans strain DSM 8628
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas benzenivorans strain DSM 8628 genome assembly, contig:

Gene Summary

Adenine Count

999054 bp

Thymine Count

999127 bp

Guanine Count

1872356 bp

Cytosine Count

1872307 bp

Genome Length

5743144 bp

Protein-coding Genes

5188 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-4-methyl-2-oxoglutarate aldolaseSAMN05216603_104320Not AvailableNegative2121820 - 212245521993.5
regulator of rnase e activity rraaSAMN05216603_104321Not AvailableNegative2122452 - 212311723428.1
regulator of rnase e activity rraaSAMN05216603_104322Not AvailableNegative2123117 - 212378223356.0
dna-binding transcriptional regulator, lysr familySAMN05216603_104323Not AvailablePositive2123888 - 212478432177.5
pimeloyl-acp methyl ester carboxylesteraseSAMN05216603_104324Not AvailablePositive2125020 - 212583830280.3
alanine or glycine:cation symporter, agcs familySAMN05216603_104325Not AvailablePositive2125998 - 212641615306.0
type i secretion c-terminal target domain (vc_a0849 subclass)SAMN05216603_1051Not AvailablePositive2126417 - 2130196125402.0
hypothetical proteinSAMN05216603_1052Not AvailablePositive2130269 - 213060712502.0
diguanylate cyclase (ggdef) domain-containing proteinSAMN05216603_1053Not AvailableNegative2130883 - 213281770989.5
predicted transglutaminase-like cysteine proteinaseSAMN05216603_1054Not AvailableNegative2132840 - 213352626278.6

Displaying genes 1971 – 1980 of 5255 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.