Pseudomonas abietaniphila strain ATCC 700689

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas abietaniphila strain ATCC 700689 is an aerobic bacterium, requiring oxygen for its metabolic processes. This strain is characterized by having a single replicon, which indicates a simplified genetic structure that is typically associated with certain bacterial species. The strain is cataloged under the accession number FNCO00000000.1, which serves as a reference for genomic data related to this organism. As a member of the Pseudomonas genus, P. abietaniphila is likely to possess diverse metabolic capabilities, allowing it to thrive in various environments. The aerobic nature of this bacterium suggests that it plays a role in processes that require oxygen, such as the degradation of organic compounds. Pseudomonas species are often noted for their bioremediation potential, particularly in the breakdown of pollutants. The ecological insight from the existence of Pseudomonas abietaniphila lies in its ability to adapt to oxygen-rich environments, contributing to nutrient cycling and the degradation of environmental contaminants. This adaptability may enhance its role in ecosystems impacted by anthropogenic activities, where oxygen availability and the presence of pollutants are prevalent. Overall, P. abietaniphila ATCC 700689 exemplifies the ecological significance of aerobic bacteria in maintaining environmental health through their metabolic activities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas abietaniphila
Strainstrain ATCC 700689

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas abietaniphila strain ATCC 700689
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas abietaniphila strain ATCC 700689 genome assembly,

Gene Summary

Adenine Count

1462017 bp

Thymine Count

1467664 bp

Guanine Count

2145501 bp

Cytosine Count

2147269 bp

Genome Length

7222451 bp

Protein-coding Genes

6454 genes

Non-Coding Genes

213 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted arabinose efflux permease, mfs familySAMN05216605_11472Not AvailableNegative5325011 - 532621641334.0
laci family transcriptional regulatorSAMN05216605_11473Not AvailablePositive5326359 - 532750741630.5
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05216605_11474Not AvailableNegative5327638 - 532837525188.5
xylulokinaseSAMN05216605_11475Not AvailableNegative5328378 - 532991055757.6
l-iditol 2-dehydrogenaseSAMN05216605_11476Not AvailableNegative5330135 - 533122039207.4
monosaccharide abc transporter membrane protein, cut2 familySAMN05216605_11477Not AvailableNegative5331368 - 533234834214.3
monosaccharide abc transporter atp-binding protein, cut2 familySAMN05216605_11478Not AvailableNegative5332332 - 533384354768.4
monosaccharide abc transporter substrate-binding protein, cut2 familySAMN05216605_11479Not AvailableNegative5333936 - 533488333100.9
antitoxin vapbSAMN05216605_11480Not AvailablePositive5335083 - 53353138572.92
trna(fmet)-specific endonuclease vapcSAMN05216605_11481Not AvailablePositive5335313 - 533571714972.1

Displaying genes 4941 – 4950 of 6667 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.