Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate kinase | SAMN05216241_102328 | Not Available | Negative | 1001852 - 1002829 | 33998.2 |
| nusb antitermination factor | SAMN05216241_102329 | Not Available | Negative | 1002837 - 1003340 | 18235.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05216241_102330 | Not Available | Negative | 1003352 - 1003813 | 17240.6 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN05216241_102331 | Not Available | Negative | 1003810 - 1004976 | 41975.6 |
| riboflavin synthase alpha chain | SAMN05216241_102332 | Not Available | Negative | 1004955 - 1005569 | 21436.6 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase | SAMN05216241_102333 | Not Available | Negative | 1005554 - 1006663 | 38420.7 |
| transcriptional repressor nrdr | SAMN05216241_102334 | Not Available | Negative | 1006680 - 1007144 | 17797.0 |
| glycine hydroxymethyltransferase | SAMN05216241_102335 | Not Available | Negative | 1007178 - 1008485 | 46762.5 |
| ribose-5-phosphate isomerase | SAMN05216241_102336 | Not Available | Negative | 1008501 - 1008953 | 15950.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05216241_102337 | Not Available | Positive | 1009175 - 1010386 | 41966.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
