Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05216241_102277 | Not Available | Negative | 956241 - 956798 | 20628.3 |
| hypothetical protein | SAMN05216241_102278 | Not Available | Negative | 957043 - 957276 | 8733.48 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05216241_102279 | Not Available | Negative | 957534 - 958175 | 23197.0 |
| large subunit ribosomal protein l21 | SAMN05216241_102280 | Not Available | Negative | 958592 - 958960 | 13253.5 |
| two component transcriptional regulator, luxr family | SAMN05216241_102281 | Not Available | Positive | 959452 - 960162 | 25674.8 |
| two component transcriptional regulator, luxr family | SAMN05216241_102282 | Not Available | Negative | 960177 - 960827 | 23665.6 |
| Trna-arg | Not Available | Not Available | Positive | 961361 - 961437 | Not Available |
| etc complex i subunit conserved region | SAMN05216241_102284 | Not Available | Negative | 961454 - 961759 | 12111.3 |
| Trna-pro | Not Available | Not Available | Positive | 961795 - 961871 | Not Available |
| predicted o-methyltransferase yrrm | SAMN05216241_102286 | Not Available | Positive | 961979 - 962641 | 23924.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
