Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit beta | SAMN05216241_102187 | Not Available | Negative | 856283 - 857398 | 39290.8 |
| ornithine cyclodeaminase | SAMN05216241_102188 | Not Available | Negative | 857402 - 858349 | 33521.8 |
| general secretion pathway protein d | SAMN05216241_102189 | Not Available | Negative | 858433 - 860766 | 82085.8 |
| hypothetical protein | SAMN05216241_102190 | Not Available | Positive | 861013 - 861270 | 9211.68 |
| uncharacterized conserved protein ybga, duf1722 family | SAMN05216241_102191 | Not Available | Negative | 861267 - 861959 | 24981.4 |
| hypothetical protein | SAMN05216241_102192 | Not Available | Negative | 861978 - 862247 | 9288.41 |
| Trna-leu | Not Available | Not Available | Positive | 862474 - 862560 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 862603 - 862689 | Not Available |
| methyltransferase | SAMN05216241_102195 | Not Available | Negative | 862722 - 863213 | 17626.7 |
| alkylresorcinol/alkylpyrone synthase | SAMN05216241_102196 | Not Available | Negative | 863210 - 864280 | 36634.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
