Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase protein tatc | SAMN05216241_102167 | Not Available | Positive | 833780 - 834613 | 31357.7 |
| seryl-trna synthetase | SAMN05216241_102168 | Not Available | Positive | 834711 - 835994 | 47254.8 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN05216241_102169 | Not Available | Positive | 835987 - 836772 | 28102.2 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05216241_102170 | Not Available | Positive | 836769 - 837440 | 24405.1 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05216241_102171 | Not Available | Positive | 837464 - 838669 | 42347.5 |
| hypothetical protein | SAMN05216241_102172 | Not Available | Positive | 838676 - 839137 | 15585.6 |
| hypothetical protein | SAMN05216241_102173 | Not Available | Negative | 839173 - 840048 | 32199.1 |
| protein translocase subunit yajc | SAMN05216241_102174 | Not Available | Positive | 840193 - 840630 | 15358.6 |
| preprotein translocase subunit secd | SAMN05216241_102175 | Not Available | Positive | 840688 - 842253 | 56720.4 |
| protein translocase subunit secf | SAMN05216241_102176 | Not Available | Positive | 842273 - 843232 | 34350.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
