Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05216241_102147 | Not Available | Positive | 810187 - 810843 | 23232.9 |
| outer membrane protein/outer membrane protein, adhesin transport system | SAMN05216241_102148 | Not Available | Positive | 810935 - 812326 | 50961.8 |
| hypothetical protein | SAMN05216241_102149 | Not Available | Positive | 812439 - 813377 | 32832.7 |
| valyl-trna synthetase | SAMN05216241_102150 | Not Available | Positive | 813625 - 816342 | 102000.0 |
| haloacetate dehalogenase | SAMN05216241_102151 | Not Available | Negative | 816457 - 817341 | 32150.1 |
| dihydroxy-acid dehydratase | SAMN05216241_102152 | Not Available | Positive | 817388 - 819193 | 64012.1 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN05216241_102153 | Not Available | Positive | 819279 - 820829 | 53330.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05216241_102154 | Not Available | Negative | 820820 - 823066 | 82025.7 |
| membrane associated serine protease, rhomboid family | SAMN05216241_102155 | Not Available | Negative | 823240 - 823959 | 25180.4 |
| exodeoxyribonuclease-3 | SAMN05216241_102156 | Not Available | Negative | 823982 - 824761 | 28891.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
