Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00255 family protein | SAMN05216241_101593 | Not Available | Positive | 624948 - 625823 | 31684.5 |
| guanylate kinase | SAMN05216241_101594 | Not Available | Positive | 625833 - 626468 | 23813.2 |
| atp-dependent proteinase. serine peptidase. merops family s16 | SAMN05216241_101595 | Not Available | Negative | 626559 - 628967 | 89183.3 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit/naphthalene 1,2-dioxygenase system ferredoxin subunit | SAMN05216241_101596 | Not Available | Positive | 629542 - 629874 | 12206.2 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN05216241_101597 | Not Available | Positive | 629882 - 631108 | 43000.1 |
| acetyltransferase | SAMN05216241_101598 | Not Available | Negative | 631130 - 633844 | 97274.9 |
| uncharacterized conserved protein | SAMN05216241_101599 | Not Available | Negative | 633956 - 634573 | 21667.4 |
| gtp cyclohydrolase i | SAMN05216241_101600 | Not Available | Negative | 634682 - 635320 | 22645.8 |
| nicotinamidase/pyrazinamidase | SAMN05216241_101601 | Not Available | Positive | 635450 - 636019 | 20689.1 |
| long-chain acyl-coa synthetase | SAMN05216241_101602 | Not Available | Negative | 636026 - 638644 | 93055.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
