Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltransferase 2. threonine peptidase. merops family t03 | SAMN05216241_101321 | Not Available | Positive | 329722 - 331581 | 66372.6 |
| uncharacterized conserved protein, upf0335 family | SAMN05216241_101322 | Not Available | Positive | 331691 - 331942 | 9664.47 |
| haloalkane dehalogenase | SAMN05216241_101323 | Not Available | Negative | 332389 - 333267 | 32701.8 |
| o-acetylserine/cysteine efflux transporter | SAMN05216241_101324 | Not Available | Negative | 333364 - 334260 | 31056.3 |
| methyl-accepting chemotaxis protein | SAMN05216241_101325 | Not Available | Negative | 334348 - 336063 | 62076.8 |
| peptide/nickel transport system substrate-binding protein | SAMN05216241_101326 | Not Available | Negative | 336071 - 337789 | 65661.9 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05216241_101327 | Not Available | Negative | 338028 - 338732 | 25069.7 |
| long-chain acyl-coa synthetase | SAMN05216241_101328 | Not Available | Negative | 338775 - 340619 | 66866.2 |
| oligoendopeptidase f | SAMN05216241_101329 | Not Available | Positive | 340717 - 342519 | 68428.3 |
| predicted unusual protein kinase regulating ubiquinone biosynthesis, aarf/abc1/ubib family | SAMN05216241_101330 | Not Available | Positive | 342623 - 344065 | 55099.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
