Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN05216241_101291 | Not Available | Positive | 300416 - 301807 | 50461.7 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05216241_101292 | Not Available | Positive | 301920 - 302531 | 22058.0 |
| trap transporter, dctm subunit | SAMN05216241_101293 | Not Available | Positive | 302559 - 303839 | 44911.2 |
| threonine dehydratase | SAMN05216241_101294 | Not Available | Positive | 303874 - 304872 | 34796.2 |
| ornithine cyclodeaminase | SAMN05216241_101295 | Not Available | Positive | 304913 - 305905 | 34288.9 |
| ectoine hydrolase | SAMN05216241_101296 | Not Available | Positive | 305940 - 307112 | 42932.0 |
| hypothetical protein | SAMN05216241_101297 | Not Available | Negative | 307290 - 307835 | 18913.9 |
| dna polymerase-3 subunit epsilon/cbs domain-containing protein | SAMN05216241_101298 | Not Available | Positive | 308070 - 309602 | 56504.7 |
| dna polymerase-3 subunit epsilon | SAMN05216241_101299 | Not Available | Positive | 309823 - 311181 | 49114.8 |
| atp-binding cassette protein, chvd family | SAMN05216241_101300 | Not Available | Positive | 311353 - 313041 | 63159.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
