Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05216241_1204 | Not Available | Positive | 2964634 - 2966016 | 50445.7 |
| signal transduction histidine kinase | SAMN05216241_1205 | Not Available | Negative | 2966024 - 2967283 | 46124.5 |
| carboxypeptidase taq | SAMN05216241_1206 | Not Available | Negative | 2967465 - 2968961 | 54982.2 |
| surfeit locus 1 family protein | SAMN05216241_1207 | Not Available | Negative | 2968958 - 2969707 | 27815.8 |
| uncharacterized conserved protein, duf983 family | SAMN05216241_1208 | Not Available | Negative | 2969697 - 2970080 | 13506.7 |
| cytochrome c oxidase subunit 3 | SAMN05216241_1209 | Not Available | Negative | 2970240 - 2971040 | 29880.2 |
| hypothetical protein | SAMN05216241_12010 | Not Available | Negative | 2971078 - 2971242 | 6218.67 |
| protoheme ix farnesyltransferase | SAMN05216241_12011 | Not Available | Negative | 2971250 - 2972164 | 31983.8 |
| cytochrome c oxidase subunit 1 | SAMN05216241_12012 | Not Available | Negative | 2972262 - 2973875 | 58852.9 |
| cytochrome c oxidase subunit 2 | SAMN05216241_12013 | Not Available | Negative | 2973952 - 2974821 | 32090.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
