Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formamidopyrimidine-dna glycosylase | SAMN05216241_101251 | Not Available | Negative | 257099 - 257884 | 28353.7 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05216241_101252 | Not Available | Positive | 258071 - 259750 | 60292.4 |
| methyl-accepting chemotaxis protein (mcp) signalling domain-containing protein | SAMN05216241_101253 | Not Available | Negative | 259763 - 261109 | 48686.7 |
| uncharacterized membrane protein | SAMN05216241_101254 | Not Available | Negative | 261242 - 262033 | 27641.5 |
| Trna-met | Not Available | Not Available | Positive | 262280 - 262352 | Not Available |
| prc-barrel domain-containing protein | SAMN05216241_101256 | Not Available | Positive | 262563 - 263222 | 21700.4 |
| two-component response regulator, amir/nast family, consists of rec and rna-binding antiterminator (antar) domains | SAMN05216241_101257 | Not Available | Negative | 263292 - 263927 | 22577.1 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN05216241_101258 | Not Available | Negative | 263957 - 265060 | 40678.7 |
| prc-barrel domain-containing protein | SAMN05216241_101259 | Not Available | Negative | 265290 - 265745 | 15273.5 |
| transmembrane transcriptional regulator (anti-sigma factor rsiw) | SAMN05216241_101260 | Not Available | Negative | 265845 - 266633 | 27990.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
