Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2'-5' rna ligase | SAMN05216241_11410 | Not Available | Negative | 2770879 - 2771451 | 20966.4 |
| signal transduction histidine kinase | SAMN05216241_11411 | Not Available | Negative | 2771512 - 2773080 | 56968.4 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05216241_11412 | Not Available | Negative | 2773110 - 2774204 | 39297.8 |
| uracil-dna glycosylase | SAMN05216241_11413 | Not Available | Positive | 2774430 - 2775026 | 22613.3 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05216241_11414 | Not Available | Negative | 2775036 - 2775833 | 28387.8 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN05216241_11415 | Not Available | Positive | 2776183 - 2777310 | 41467.6 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05216241_11416 | Not Available | Positive | 2777400 - 2778113 | 27110.9 |
| trap transporter, dctm subunit | SAMN05216241_11417 | Not Available | Positive | 2778106 - 2779671 | 55026.9 |
| hypothetical protein | SAMN05216241_11418 | Not Available | Positive | 2780310 - 2780753 | 16051.1 |
| hypothetical protein | SAMN05216241_11419 | Not Available | Positive | 2780859 - 2782607 | 64298.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
