Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05216241_11143 | Not Available | Negative | 2643340 - 2644116 | 28448.4 |
| glyoxylate reductase | SAMN05216241_11144 | Not Available | Negative | 2644568 - 2645557 | 36151.6 |
| sh3-like domain-containing protein | SAMN05216241_11145 | Not Available | Positive | 2645817 - 2646308 | 17844.4 |
| phytanoyl-coa dioxygenase (phyh) | SAMN05216241_11146 | Not Available | Positive | 2646413 - 2647261 | 31203.7 |
| hypothetical protein | SAMN05216241_11147 | Not Available | Negative | 2647400 - 2649106 | 57389.8 |
| dihydrolipoamide dehydrogenase | SAMN05216241_11148 | Not Available | Negative | 2649423 - 2650820 | 48959.8 |
| hypothetical protein | SAMN05216241_11149 | Not Available | Positive | 2651011 - 2651403 | 14684.7 |
| heat shock protein hsp20 | SAMN05216241_11150 | Not Available | Positive | 2651673 - 2652170 | 18284.3 |
| aspartate semialdehyde dehydrogenase | SAMN05216241_11151 | Not Available | Negative | 2652364 - 2653458 | 39775.1 |
| mrna interferase rele/stbe | SAMN05216241_11152 | Not Available | Positive | 2653567 - 2653824 | 9724.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
