Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit alpha | SAMN05216241_11029 | Not Available | Positive | 2530707 - 2532320 | 55246.7 |
| formate-tetrahydrofolate ligase | SAMN05216241_11030 | Not Available | Positive | 2532530 - 2534200 | 59553.4 |
| Trna-thr | Not Available | Not Available | Positive | 2534403 - 2534478 | Not Available |
| hypothetical protein | SAMN05216241_11032 | Not Available | Positive | 2534527 - 2534667 | 4824.05 |
| cbs domain-containing protein | SAMN05216241_11033 | Not Available | Negative | 2534697 - 2535095 | 14705.2 |
| lactoylglutathione lyase | SAMN05216241_11034 | Not Available | Negative | 2535215 - 2535655 | 16627.7 |
| potassium/proton antiporter, cpa1 family | SAMN05216241_11035 | Not Available | Positive | 2535833 - 2537641 | 62721.8 |
| hypothetical protein | SAMN05216241_11036 | Not Available | Negative | 2537728 - 2537877 | 5436.84 |
| cold-shock dna-binding protein family | SAMN05216241_11037 | Not Available | Positive | 2538207 - 2538416 | 7599.99 |
| protein of unknown function | SAMN05216241_11038 | Not Available | Positive | 2538604 - 2539038 | 15404.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
