Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05216241_105191 | Not Available | Negative | 1893930 - 1894724 | 28475.4 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05216241_105192 | Not Available | Negative | 1894932 - 1895708 | 28411.3 |
| methyltransferase domain-containing protein | SAMN05216241_105193 | Not Available | Positive | 1895912 - 1896871 | 36148.1 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05216241_105194 | Not Available | Positive | 1897207 - 1898439 | 46078.8 |
| acetyltransferase (gnat) family protein | SAMN05216241_105195 | Not Available | Negative | 1898436 - 1898936 | 18839.4 |
| cytochrome c biogenesis protein ccmg, thiol:disulfide interchange protein dsbe | SAMN05216241_105196 | Not Available | Negative | 1898963 - 1899550 | 20664.2 |
| cytochrome c-type biogenesis protein ccme | SAMN05216241_105197 | Not Available | Negative | 1899547 - 1900008 | 16567.2 |
| heme exporter protein d | SAMN05216241_105198 | Not Available | Negative | 1900005 - 1900196 | 6998.53 |
| heme exporter protein c | SAMN05216241_105199 | Not Available | Negative | 1900201 - 1900962 | 27614.1 |
| heme exporter protein b | SAMN05216241_105200 | Not Available | Negative | 1901174 - 1901890 | 24094.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
