Limimonas halophila strain DSM 25584

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Rhodovibrionaceae

Genus

Limimonas

Description

Limimonas halophila strain DSM 25584 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile, indicating that it does not possess flagella or other structures for movement. It thrives at an optimal temperature of 37°C, classifying it as mesophilic, which means it grows best in moderate temperature conditions. The genetic makeup of Limimonas halophila strain DSM 25584 is notable for having a single replicon, which is an integral feature of its genomic structure. The strain is cataloged under accession number FNCE00000000.1, providing a reference for its genetic information in biological databases. The ecological insight into Limimonas halophila can be derived from its halophilic nature, which suggests that it may play a role in saline environments. These bacteria are often involved in the biogeochemical cycles of their habitats, potentially contributing to nutrient cycling and the degradation of organic materials in salt-rich ecosystems. As an aerobic organism, it likely utilizes oxygen in its metabolic processes, which can influence the dynamics of microbial communities in its environment. Understanding the traits of Limimonas halophila strain DSM 25584 enhances our knowledge of microbial diversity and ecological interactions in saline ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyRhodovibrionaceae
GenusLimimonas
SpeciesLimimonas halophila
Strainstrain DSM 25584

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatThe saline mud of the hypersaline lake
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limimonas halophila strain DSM 25584 genome assembly, contig:

Gene Summary

Adenine Count

463676 bp

Thymine Count

463813 bp

Guanine Count

1062909 bp

Cytosine Count

1048718 bp

Genome Length

3039361 bp

Protein-coding Genes

2827 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diadenosine tetraphosphate (ap4a) hydrolaseSAMN05216241_10571Not AvailableNegative1774217 - 177458513677.1
phosphoribosyl-atp pyrophosphataseSAMN05216241_10572Not AvailableNegative1774616 - 177499613474.7
imidazole glycerol phosphate synthase subunit hisfSAMN05216241_10573Not AvailableNegative1775002 - 177579027479.7
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseSAMN05216241_10574Not AvailableNegative1775807 - 177654125760.7
protein n-acetyltransferase, rimj/riml familySAMN05216241_10575Not AvailableNegative1776538 - 177709220646.6
imidazole glycerol phosphate synthase subunit hishSAMN05216241_10576Not AvailableNegative1777097 - 177774422834.2
imidazoleglycerol-phosphate dehydrataseSAMN05216241_10577Not AvailableNegative1777825 - 177841220755.7
trypsin-like peptidase domain-containing proteinSAMN05216241_10578Not AvailablePositive1778578 - 177990347215.4
atp-dependent hsluv protease, peptidase subunit hslvSAMN05216241_10579Not AvailablePositive1779912 - 178052321879.2
atp-dependent hsluv protease atp-binding subunit hsluSAMN05216241_10580Not AvailablePositive1780513 - 178185049606.1

Displaying genes 1681 – 1690 of 2889 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.