Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-(apurinic or apyrimidinic site) lyase | SAMN05216241_10541 | Not Available | Positive | 1740298 - 1741140 | 30641.0 |
| aminomethyltransferase | SAMN05216241_10542 | Not Available | Positive | 1741322 - 1742467 | 42449.6 |
| hypothetical protein | SAMN05216241_10543 | Not Available | Negative | 1742565 - 1742948 | 13838.0 |
| methionine aminopeptidase, type i | SAMN05216241_10544 | Not Available | Positive | 1743182 - 1744009 | 30286.2 |
| protein of unknown function | SAMN05216241_10545 | Not Available | Negative | 1744023 - 1744661 | 22236.5 |
| sulfate permease, sulp family | SAMN05216241_10546 | Not Available | Negative | 1744750 - 1746522 | 61777.8 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05216241_10547 | Not Available | Negative | 1746535 - 1747407 | 32286.8 |
| 1-cys peroxiredoxin | SAMN05216241_10548 | Not Available | Negative | 1747486 - 1748130 | 23842.2 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN05216241_10549 | Not Available | Positive | 1748262 - 1749236 | 34841.9 |
| dna repair protein radc | SAMN05216241_10550 | Not Available | Positive | 1749329 - 1750045 | 25935.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
